BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A10LP1|AL429005
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig285 473 e-133
3x_Contig924 391 e-108
>3x_Contig285
Length = 777
Score = 473 bits (237), Expect = e-133
Identities = 237/237 (100%)
Strand = Plus / Minus
Query: 655 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 715
Query: 715 tccgcttaaaacttgattacctggtgcggctaactctaatctaatgattaaagacatggc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tccgcttaaaacttgattacctggtgcggctaactctaatctaatgattaaagacatggc 655
Query: 775 agtacctgccataccacagaaaatagcaaagataaagtataaaacagcaatatctttagc 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agtacctgccataccacagaaaatagcaaagataaagtataaaacagcaatatctttagc 595
Query: 835 atttgtagaatataatcatctttcgatcattaatttatttttataattattatatta 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atttgtagaatataatcatctttcgatcattaatttatttttataattattatatta 538
>3x_Contig924
Length = 2007
Score = 391 bits (196), Expect = e-108
Identities = 215/222 (96%)
Strand = Plus / Plus
Query: 1 atcaggaacagaatttataggtttaaattctttatattttaaattaaattcatcaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1780 atcaggaacagaatttataggtttaaattctttatattttaaattaaattcatcaaaata 1839
Query: 61 aaatttatcttgattaaattctaaatttttaaatgaagataatcataaattaatattata 120
||||||||||||||||||||||||||| |||||||||||||||| || |||||||||
Sbjct: 1840 aaatttatcttgattaaattctaaattgttaaatgaagataatcggggatgaatattata 1899
Query: 121 tttataatcataaattactatataaratggcatagaaaacaaatgttggtataaaacagg 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1900 tttataatcataaattactatataaaatggcatagaaaacaaatgttggtataaaacagg 1959
Query: 181 gtcaccaccacctgctacttcgaagaatgaagtattgaagtt 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1960 gtcaccaccacctgctacttcgaagaatgaagtattgaagtt 2001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9308
Number of Sequences: 1807
Number of extensions: 9308
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 2
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)